Post details: Microbes take us beyond "molecular reductionism"

01/25/07

Permalinkby 07:25:05 am, Categories: Literature - Articles, 362 words   English (UK)

Microbes take us beyond "molecular reductionism"

In recent years, microbes have emerged as life forms that do not fit easily into the Darwinian mould. "In the wild, microbes form communities, invade biochemical niches and partake in biogeochemical cycles. The available studies strongly indicate that microbes absorb and discard genes as needed, in response to their environment. Rather than discrete genomes, we see a continuum of genomic possibilities, which casts doubt on the validity of the concept of a 'species' when extended into the microbial realm." The research that has stimulated this new thinking concerns "horizontal gene transfer (HGT), the non-genealogical transfer of genetic material from one organism to another - such as from one bacterium to another or from viruses to bacteria." The implication is that neodarwinism is not a very useful model to work with. Also in the melting pot of new thinking is the "clearly documented optimization of the [genetic] code. Its special role in any form of life leads to the striking prediction that early life evolved in a lamarckian way, with vertical descent marginalized by the more powerful early forms of HGT." In their essay, Goldenfeld and Woese provide a challenging and stimulating challege for biologists to get out of the rut made by the "molecular reductionism that dominated twentieth-century biology".

Biology's next revolution
Nigel Goldenfeld and Carl Woese
Nature 445, 369 (25 January 2007) | doi:10.1038/445369a

Abstract: The emerging picture of microbes as gene-swapping collectives demands a revision of such concepts as organism, species and evolution itself.

One of the most fundamental patterns of scientific discovery is the revolution in thought that accompanies a new body of data. Satellite-based astronomy has, during the past decade, overthrown our most cherished ideas of cosmology, especially those relating to the size, dynamics and composition of the Universe.
Similarly, the convergence of fresh theoretical ideas in evolution and the coming avalanche of genomic data will profoundly alter our understanding of the biosphere - and is likely to lead to revision of concepts such as species, organism and evolution. Here we explain why we foresee such a dramatic transformation, and why we believe the molecular reductionism that dominated twentieth-century biology will be superseded by an interdisciplinary approach that embraces collective phenomena.
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